SNIA-SDC23-GuilhermeDaCostaMartins-Pantheon-DNA-Data-Storage-CODEC_1.pdf

1、#|2023 SNIA.All Rights Reserved.Virtual ConferenceSeptember 28-29,2021Pantheon DNA Data Storage CODECExperiences,Challenges,and InnovationsAndr Guilherme da Costa Martins,PhD Biomed.Sci.Bioinformatics researcher Institute for Technological Research-IPT,Brazil andremartinsipt.br Who are we?The Instit

2、ute for Technological Research-IPT has been contributing actively for 124 years to science and technical advances.We provide technical solutions for industry,governments,and society,enabling them to overcome the challenges of our time.1|2021 Storage Developer Conference.IPT-Lenovo.All Rights Reserve

3、d.ATGCTAGCAAGGCGTGCAATGCTAGCAAGGCGTGCAOriginalBinary dataEncoded DNAStoraged DNA moleculesSequenced DNARecoveredBinary dataDNASequencingDNASynthesisENCODINGDECODING2|2023 SNIA.All Rights Reserved.A versatile CODEC:Robust DNA data architecture Binary data pre-processing Multiple choices for mapping a

4、lgorithms Multi-layer ECC strategy Supports SNIAs sectors(S0&S1)Includes NGS processing algorithms Compatible with multiple sequencing and storage strategiesThe Pantheon CODEC3|2023 SNIA.All Rights Reserved.ApolloArtemisC hironHermesHephaestusG aia4|2023 SNIA.All Rights Reserved.5|2023 SNIA.All Righ

5、ts Reserved.6|2023 SNIA.All Rights Reserved.Apollo,the encoding moduleApollo and the Muses-Michel Dorigny,early 1640s7|2023 SNIA.All Rights Reserved.5-3EndPrimerStartPrimerAddresslabelPayloadInner ECCAdenineGuanineThymineCytosineApollo:oligonucleotide structure8|2023 SNIA.All Rights Reserved.ATTGCAT

6、GGATAACGAnalysis&Processing5-3EndPrimerStartPrimerAddresslabelPayloadInner ECCAdenineGuanineThymineCytosineMetadata from file system9|2023 SNIA.All Rights Reserved.Apollo:encoding process(.)Metadata fromfile systemCodec parameters from data blocksMetadata fromdata blocks(.)10|2023 SNIA.All Rights Re